Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esterase family protein | DW048_13020 | Not Available | Positive | 2927642 - 2928460 | 30705.9 |
| sdr family oxidoreductase | DW048_13025 | Not Available | Positive | 2928465 - 2929223 | 27233.0 |
| alpha-amlyase | DW048_13030 | Not Available | Negative | 2929319 - 2929567 | 9267.24 |
| sodium ion-translocating decarboxylase subunit beta | DW048_13035 | Not Available | Negative | 2929742 - 2930902 | 40880.4 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | DW048_13040 | Not Available | Negative | 2930904 - 2931335 | 15152.5 |
| lamin tail domain-containing protein | DW048_13045 | Not Available | Negative | 2931359 - 2932288 | 34102.0 |
| acyl-coa carboxylase subunit beta | DW048_13050 | Not Available | Negative | 2932316 - 2933869 | 56473.9 |
| methylmalonyl-coa epimerase | DW048_13055 | Not Available | Negative | 2933972 - 2934385 | 14910.1 |
| nad(p)h nitroreductase | DW048_13065 | Not Available | Positive | 2935609 - 2936145 | 20081.4 |
| hypothetical protein | DW048_13070 | Not Available | Positive | 2936148 - 2936474 | 11854.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

