Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1295 domain-containing protein | DW048_12960 | Not Available | Negative | 2914420 - 2915184 | 29496.6 |
| hypothetical protein | DW048_12965 | Not Available | Positive | 2915347 - 2915607 | 10408.1 |
| gnat family n-acetyltransferase | DW048_12970 | Not Available | Positive | 2915752 - 2916213 | 17929.7 |
| hypothetical protein | DW048_12975 | Not Available | Positive | 2916407 - 2916634 | 8544.43 |
| ragb/susd family nutrient uptake outer membrane protein | DW048_12980 | Not Available | Negative | 2916842 - 2918899 | 77763.2 |
| tonb-dependent receptor | DW048_12985 | Not Available | Negative | 2918921 - 2922145 | 119858.0 |
| crp/fnr family transcriptional regulator | DW048_13000 | Not Available | Positive | 2923382 - 2923945 | 22255.1 |
| acyltransferase | DW048_13005 | Not Available | Positive | 2924063 - 2925214 | 43081.8 |
| transcriptional repressor | DW048_13010 | Not Available | Negative | 2925387 - 2925812 | 16193.7 |
| heavy metal translocating p-type atpase | DW048_13015 | Not Available | Negative | 2925826 - 2927544 | 62529.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

