Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_12765 | Not Available | Negative | 2872214 - 2872717 | 19045.6 |
| hypothetical protein | DW048_12770 | Not Available | Negative | 2872721 - 2873450 | 28535.7 |
| hypothetical protein | DW048_12780 | Not Available | Positive | 2874544 - 2874735 | 7717.35 |
| arc family dna-binding protein | DW048_12785 | Not Available | Negative | 2874879 - 2875073 | 7471.13 |
| spfh domain-containing protein | DW048_12790 | Not Available | Negative | 2875082 - 2876032 | 35407.4 |
| helicase | DW048_12800 | Not Available | Positive | 2876602 - 2878602 | 76879.1 |
| threonylcarbamoyl-amp synthase | DW048_12805 | Not Available | Positive | 2878609 - 2879223 | 23191.3 |
| mechanosensitive ion channel family protein | DW048_12810 | Not Available | Positive | 2879272 - 2880105 | 30653.8 |
| fpra family a-type flavoprotein | DW048_12815 | Not Available | Negative | 2880201 - 2881388 | 44710.8 |
| tigr01212 family radical sam protein | DW048_12820 | Not Available | Negative | 2881404 - 2882330 | 35569.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

