Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trka family potassium uptake protein | DW048_12710 | Not Available | Positive | 2857779 - 2858465 | 25637.0 |
| duf4738 domain-containing protein | DW048_12715 | Not Available | Positive | 2858680 - 2859249 | 21153.6 |
| hypothetical protein | DW048_12720 | Not Available | Positive | 2859342 - 2859782 | 16654.3 |
| l-serine ammonia-lyase | DW048_12725 | Not Available | Negative | 2859962 - 2861170 | 43967.2 |
| metallophosphatase | DW048_12730 | Not Available | Negative | 2861320 - 2862483 | 44516.0 |
| susc/raga family tonb-linked outer membrane protein | DW048_12740 | Not Available | Negative | 2863971 - 2867324 | 125069.0 |
| fecr family protein | DW048_12745 | Not Available | Negative | 2867340 - 2868509 | 44487.5 |
| rna polymerase sigma-70 factor | DW048_12750 | Not Available | Negative | 2868613 - 2869164 | 21576.8 |
| endonuclease muts2 | DW048_12755 | Not Available | Negative | 2869244 - 2871748 | 95090.5 |
| Trna-ser | Not Available | Not Available | Positive | 2871895 - 2871982 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

