Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | DW048_12625 | Not Available | Negative | 2835816 - 2837489 | 62975.0 |
| isochorismate synthase | DW048_12630 | Not Available | Negative | 2837516 - 2838658 | 43212.4 |
| hotdog fold thioesterase | DW048_12635 | Not Available | Negative | 2838655 - 2839062 | 14518.5 |
| pyridine nucleotide-disulfide oxidoreductase | DW048_12650 | Not Available | Positive | 2842665 - 2845166 | 90744.7 |
| marr family transcriptional regulator | DW048_12655 | Not Available | Positive | 2845200 - 2845529 | 12226.9 |
| diacylglucosamine hydrolase | DW048_12665 | Not Available | Positive | 2847169 - 2847759 | 22791.2 |
| Trna-glu | Not Available | Not Available | Positive | 2848842 - 2848916 | Not Available |
| hypothetical protein | DW048_12685 | Not Available | Positive | 2849059 - 2850348 | 48123.5 |
| deoxyribonuclease iv | DW048_12690 | Not Available | Positive | 2850391 - 2851227 | 31424.5 |
| marr family transcriptional regulator | DW048_12695 | Not Available | Negative | 2851702 - 2853774 | 78389.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

