Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | DW048_12575 | Not Available | Negative | 2825202 - 2826218 | 39210.6 |
| sam-dependent dna methyltransferase | DW048_12580 | Not Available | Negative | 2826234 - 2827742 | 57150.0 |
| restriction endonuclease subunit r | DW048_12585 | Not Available | Negative | 2827745 - 2830060 | 88014.2 |
| xre family transcriptional regulator | DW048_12590 | Not Available | Negative | 2830075 - 2830281 | 7515.05 |
| hypothetical protein | DW048_12595 | Not Available | Negative | 2830380 - 2831123 | 28969.2 |
| duf4250 domain-containing protein | DW048_12600 | Not Available | Positive | 2831447 - 2831578 | 5169.19 |
| arac family transcriptional regulator | DW048_12605 | Not Available | Negative | 2831640 - 2832524 | 34283.2 |
| o-succinylbenzoic acid--coa ligase | DW048_12610 | Not Available | Negative | 2832780 - 2833865 | 40588.3 |
| o-succinylbenzoate synthase | DW048_12615 | Not Available | Negative | 2833862 - 2834917 | 39848.0 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | DW048_12620 | Not Available | Negative | 2834995 - 2835816 | 30387.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

