Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3987 domain-containing protein | DW048_12520 | Not Available | Positive | 2815086 - 2816459 | 51793.5 |
| hypothetical protein | DW048_12525 | Not Available | Positive | 2816575 - 2817594 | 38766.7 |
| hypothetical protein | DW048_12530 | Not Available | Positive | 2817888 - 2818262 | 14603.5 |
| hypothetical protein | DW048_12535 | Not Available | Positive | 2818267 - 2819499 | 46161.1 |
| hypothetical protein | DW048_12540 | Not Available | Positive | 2819492 - 2820070 | 21948.2 |
| integrase | DW048_12545 | Not Available | Negative | 2820109 - 2820915 | 31840.6 |
| restriction endonuclease subunit s | DW048_12550 | Not Available | Positive | 2820960 - 2822315 | 50857.5 |
| restriction endonuclease | DW048_12555 | Not Available | Positive | 2822369 - 2822800 | 16332.0 |
| restriction endonuclease subunit s | DW048_12560 | Not Available | Negative | 2822780 - 2824081 | 49037.8 |
| fic family protein | DW048_12570 | Not Available | Negative | 2824733 - 2825209 | 18191.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

