Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DW048_12350 | Not Available | Positive | 2777727 - 2778815 | 41262.2 |
| hypothetical protein | DW048_12355 | Not Available | Positive | 2778812 - 2779624 | 31065.2 |
| lytic transglycosylase f | DW048_12360 | Not Available | Negative | 2779637 - 2781016 | 52064.2 |
| uridine kinase | DW048_12365 | Not Available | Negative | 2781013 - 2781624 | 23271.3 |
| dabb family protein | DW048_12370 | Not Available | Positive | 2781730 - 2782029 | 11090.4 |
| paai family thioesterase | DW048_12375 | Not Available | Positive | 2782040 - 2782531 | 18785.7 |
| atp phosphoribosyltransferase | DW048_12380 | Not Available | Positive | 2782760 - 2783611 | 31336.4 |
| histidinol dehydrogenase | DW048_12385 | Not Available | Positive | 2783661 - 2784941 | 46544.2 |
| histidinol-phosphate transaminase | DW048_12390 | Not Available | Positive | 2784944 - 2785984 | 39610.4 |
| nad(+) synthase | DW048_12400 | Not Available | Negative | 2787195 - 2789120 | 71124.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

