Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper resistance protein nlpe | DW048_00970 | Not Available | Positive | 199428 - 199883 | 16818.0 |
| hypothetical protein | DW048_00980 | Not Available | Negative | 200748 - 201209 | 17602.2 |
| hypothetical protein | DW048_00985 | Not Available | Negative | 201573 - 201812 | 9572.75 |
| hypothetical protein | DW048_00995 | Not Available | Negative | 203890 - 204480 | 23706.6 |
| fusion protein | DW048_01000 | Not Available | Negative | 204545 - 205561 | 38758.8 |
| hypothetical protein | DW048_01005 | Not Available | Negative | 205594 - 205848 | 9445.28 |
| hypothetical protein | DW048_01010 | Not Available | Positive | 205853 - 206086 | 8282.95 |
| arac family transcriptional regulator | DW048_01015 | Not Available | Negative | 206597 - 207535 | 36351.2 |
| tolc family protein | DW048_01030 | Not Available | Positive | 211916 - 213199 | 48430.7 |
| hypothetical protein | DW048_01035 | Not Available | Positive | 213245 - 213484 | 8779.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

