Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssra-binding protein | DW048_12175 | Not Available | Positive | 2743526 - 2743978 | 17572.4 |
| nucleotidyltransferase family protein | DW048_12185 | Not Available | Negative | 2746902 - 2747747 | 32185.8 |
| phosphotransferase | DW048_12190 | Not Available | Negative | 2747744 - 2749174 | 55467.0 |
| purine permease | DW048_12195 | Not Available | Negative | 2749277 - 2750608 | 46642.3 |
| xanthine phosphoribosyltransferase | DW048_12200 | Not Available | Negative | 2750613 - 2751179 | 20888.7 |
| helix-turn-helix domain-containing protein | DW048_12205 | Not Available | Positive | 2751917 - 2752858 | 36522.2 |
| hypothetical protein | DW048_12210 | Not Available | Positive | 2752818 - 2753033 | 8370.96 |
| site-specific integrase | DW048_12215 | Not Available | Positive | 2752990 - 2754108 | 43461.9 |
| hypothetical protein | DW048_12220 | Not Available | Negative | 2754172 - 2754363 | 7706.83 |
| transposase | DW048_12225 | Not Available | Positive | 2754337 - 2755167 | 32295.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

