Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_12045 | Not Available | Positive | 2723756 - 2723950 | 7364.03 |
| methylglyoxal synthase | DW048_12050 | Not Available | Negative | 2723985 - 2724521 | 20469.6 |
| arginase family protein | DW048_12055 | Not Available | Negative | 2724574 - 2725383 | 30907.8 |
| alpha-glucan family phosphorylase | DW048_12060 | Not Available | Negative | 2725400 - 2727958 | 97897.3 |
| rna polymerase sigma factor | DW048_12075 | Not Available | Negative | 2731252 - 2731749 | 19554.6 |
| hsp20/alpha crystallin family protein | DW048_12080 | Not Available | Negative | 2731849 - 2732277 | 16605.9 |
| ferritin | DW048_12095 | Not Available | Negative | 2734192 - 2734674 | 18375.7 |
| ferritin | DW048_12105 | Not Available | Negative | 2735474 - 2735926 | 17767.4 |
| hypothetical protein | DW048_12110 | Not Available | Negative | 2736086 - 2736295 | 7929.4 |
| hypothetical protein | DW048_12115 | Not Available | Positive | 2736479 - 2736700 | 8624.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

