Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pirin family protein | DW048_11795 | Not Available | Positive | 2662098 - 2662802 | 26517.3 |
| hypothetical protein | DW048_11800 | Not Available | Negative | 2663025 - 2663318 | 11293.8 |
| exodeoxyribonuclease iii | DW048_11805 | Not Available | Negative | 2663475 - 2664230 | 29696.0 |
| preprotein translocase subunit secg | DW048_11810 | Not Available | Negative | 2664394 - 2664759 | 12571.2 |
| tetratricopeptide repeat protein | DW048_11815 | Not Available | Negative | 2664765 - 2665517 | 29479.2 |
| hypothetical protein | DW048_11820 | Not Available | Negative | 2665534 - 2666061 | 19738.6 |
| sigma-54-dependent fis family transcriptional regulator | DW048_11825 | Not Available | Negative | 2666048 - 2667313 | 46861.1 |
| inositol-3-phosphate synthase | DW048_11830 | Not Available | Negative | 2667480 - 2668787 | 48823.8 |
| ribokinase | DW048_11835 | Not Available | Positive | 2668923 - 2669819 | 33171.6 |
| hypothetical protein | DW048_11845 | Not Available | Positive | 2670828 - 2674310 | 129540.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

