Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase recq | DW048_11685 | Not Available | Negative | 2644545 - 2646962 | 91808.2 |
| Trna-thr | Not Available | Not Available | Positive | 2647073 - 2647146 | Not Available |
| hypothetical protein | DW048_11695 | Not Available | Positive | 2647151 - 2647399 | 9849.11 |
| duf4199 domain-containing protein | DW048_11700 | Not Available | Positive | 2647406 - 2647939 | 20498.6 |
| hypothetical protein | DW048_11710 | Not Available | Positive | 2648897 - 2649445 | 20757.9 |
| hypothetical protein | DW048_11715 | Not Available | Positive | 2649393 - 2650094 | 26539.9 |
| manganese efflux pump | DW048_11720 | Not Available | Positive | 2650098 - 2650670 | 21225.7 |
| fad:protein fmn transferase | DW048_11725 | Not Available | Positive | 2650684 - 2651700 | 37820.5 |
| marc family protein | DW048_11730 | Not Available | Negative | 2651859 - 2652461 | 22140.0 |
| crp/fnr family transcriptional regulator | DW048_11735 | Not Available | Positive | 2652645 - 2653322 | 26004.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

