Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | DW048_00890 | Not Available | Negative | 178236 - 178937 | 26605.4 |
| glutamine synthetase type iii | DW048_00895 | Not Available | Negative | 179100 - 181289 | 82847.0 |
| hypothetical protein | DW048_00900 | Not Available | Positive | 181465 - 183663 | 86239.0 |
| abc transporter permease | DW048_00915 | Not Available | Positive | 186229 - 187401 | 43620.6 |
| abc transporter permease | DW048_00920 | Not Available | Positive | 187385 - 188575 | 44503.8 |
| arac family transcriptional regulator | DW048_00935 | Not Available | Negative | 191789 - 192676 | 33845.8 |
| polyisoprenoid-binding protein | DW048_00945 | Not Available | Positive | 193796 - 194494 | 26154.4 |
| pirin family protein | DW048_00950 | Not Available | Positive | 194502 - 195365 | 32038.6 |
| hypothetical protein | DW048_00955 | Not Available | Positive | 195538 - 195858 | 12041.9 |
| hypothetical protein | DW048_00965 | Not Available | Positive | 198332 - 199348 | 39066.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

