Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase hflx | DW048_11565 | Not Available | Negative | 2608868 - 2610121 | 47629.5 |
| ragb/susd family nutrient uptake outer membrane protein | DW048_11570 | Not Available | Negative | 2610213 - 2611799 | 58810.6 |
| tonb-dependent receptor | DW048_11575 | Not Available | Negative | 2611823 - 2614996 | 116950.0 |
| glycosyltransferase | DW048_11585 | Not Available | Positive | 2616273 - 2617373 | 41630.4 |
| putative colanic acid biosynthesis acetyltransferase | DW048_11590 | Not Available | Positive | 2617376 - 2617915 | 20372.6 |
| acyltransferase | DW048_11595 | Not Available | Positive | 2617944 - 2618903 | 37296.9 |
| glycosyltransferase family 2 protein | DW048_11600 | Not Available | Positive | 2618915 - 2619820 | 35756.9 |
| gdp-mannose 4,6-dehydratase | DW048_11610 | Not Available | Positive | 2620749 - 2621828 | 40983.1 |
| gdp-l-fucose synthase | DW048_11615 | Not Available | Positive | 2621849 - 2622931 | 41079.2 |
| mannose-1-phosphate guanylyltransferase | DW048_11620 | Not Available | Positive | 2622946 - 2623989 | 39411.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

