Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine phosphatase family protein | DW048_11500 | Not Available | Negative | 2587936 - 2588454 | 19475.5 |
| ribosome small subunit-dependent gtpase a | DW048_11515 | Not Available | Positive | 2591355 - 2592287 | 35098.8 |
| m20/m25/m40 family metallo-hydrolase | DW048_11520 | Not Available | Positive | 2592301 - 2593320 | 38293.7 |
| efflux rnd transporter periplasmic adaptor subunit | DW048_11525 | Not Available | Positive | 2593407 - 2594483 | 39686.0 |
| tolc family protein | DW048_11535 | Not Available | Positive | 2597534 - 2598853 | 50561.8 |
| amino acid permease | DW048_11540 | Not Available | Positive | 2598942 - 2600600 | 59786.5 |
| alpha-n-acetylglucosaminidase | DW048_11545 | Not Available | Negative | 2600774 - 2602930 | 82746.5 |
| fumarate hydratase | DW048_11550 | Not Available | Negative | 2603033 - 2604676 | 60487.7 |
| coce/nond family hydrolase | DW048_11555 | Not Available | Positive | 2604815 - 2606722 | 73940.9 |
| duf4954 family protein | DW048_11560 | Not Available | Negative | 2606869 - 2608854 | 74479.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

