Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | DW048_11375 | Not Available | Positive | 2561365 - 2562126 | 29043.8 |
| class i fructose-bisphosphate aldolase | DW048_11380 | Not Available | Positive | 2562278 - 2563330 | 38051.5 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | DW048_11385 | Not Available | Positive | 2563492 - 2564718 | 45926.6 |
| phospholipase | DW048_11390 | Not Available | Positive | 2564723 - 2565142 | 15918.1 |
| metal abc transporter permease | DW048_11395 | Not Available | Positive | 2565195 - 2566046 | 31184.2 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | DW048_11400 | Not Available | Positive | 2566030 - 2566458 | 16199.1 |
| hypothetical protein | DW048_11405 | Not Available | Positive | 2566520 - 2566741 | 8312.45 |
| hypothetical protein | DW048_11415 | Not Available | Negative | 2568594 - 2568929 | 12878.8 |
| thioredoxin | DW048_11420 | Not Available | Negative | 2568965 - 2569279 | 11454.8 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | DW048_11435 | Not Available | Positive | 2574006 - 2574713 | 26073.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

