Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DW048_11265 | Not Available | Positive | 2532012 - 2532509 | 19135.2 |
| hypothetical protein | DW048_11270 | Not Available | Positive | 2532567 - 2535575 | 110545.0 |
| deda family protein | DW048_11280 | Not Available | Negative | 2536613 - 2537080 | 17015.3 |
| hypothetical protein | DW048_11285 | Not Available | Negative | 2537056 - 2537991 | 35926.8 |
| phosphoribosylamine--glycine ligase | DW048_11290 | Not Available | Negative | 2538010 - 2539278 | 45595.0 |
| rna methyltransferase | DW048_11300 | Not Available | Negative | 2541511 - 2542959 | 56204.3 |
| type ii toxin-antitoxin system hicb family antitoxin | DW048_11305 | Not Available | Negative | 2543471 - 2543662 | 7388.35 |
| serine acetyltransferase | DW048_11310 | Not Available | Negative | 2543813 - 2544721 | 32799.2 |
| ribonuclease r | DW048_11315 | Not Available | Negative | 2545022 - 2547169 | 81953.4 |
| cation transporter | DW048_11320 | Not Available | Positive | 2547300 - 2548202 | 32965.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

