Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannose-1-phosphate guanylyltransferase | DW048_11150 | Not Available | Negative | 2500672 - 2501715 | 39479.2 |
| Trna-leu | Not Available | Not Available | Positive | 2501900 - 2501986 | Not Available |
| transposase family protein | DW048_11160 | Not Available | Positive | 2502153 - 2502319 | 6469.75 |
| ragb/susd family nutrient uptake outer membrane protein | DW048_11170 | Not Available | Positive | 2505796 - 2507835 | 76726.5 |
| hypothetical protein | DW048_11175 | Not Available | Positive | 2507855 - 2510167 | 86461.1 |
| hypothetical protein | DW048_11180 | Not Available | Negative | 2510198 - 2510452 | 10260.6 |
| pectate lyase | DW048_11185 | Not Available | Positive | 2510436 - 2512577 | 81672.3 |
| duf1593 domain-containing protein | DW048_11190 | Not Available | Positive | 2512594 - 2513949 | 51380.7 |
| aaa family atpase | DW048_11195 | Not Available | Negative | 2514001 - 2515728 | 67928.9 |
| l-aspartate oxidase | DW048_11200 | Not Available | Negative | 2515978 - 2517558 | 58967.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

