Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside kinase | DW048_11095 | Not Available | Negative | 2489149 - 2490822 | 64724.8 |
| na/pi cotransporter family protein | DW048_11100 | Not Available | Positive | 2490904 - 2492595 | 62887.8 |
| na+-dependent phosphate transporter | DW048_11105 | Not Available | Positive | 2492729 - 2493160 | 16367.7 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | DW048_11110 | Not Available | Negative | 2493239 - 2494105 | 31372.7 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | DW048_11115 | Not Available | Negative | 2494127 - 2494711 | 21446.7 |
| nad-dependent deacylase | DW048_11120 | Not Available | Positive | 2494839 - 2495537 | 25689.8 |
| rubredoxin | DW048_11125 | Not Available | Positive | 2495612 - 2495776 | 5868.75 |
| polyribonucleotide nucleotidyltransferase | DW048_11130 | Not Available | Negative | 2495961 - 2498096 | 78613.7 |
| transcription elongation factor grea | DW048_11140 | Not Available | Positive | 2499660 - 2500124 | 16780.4 |
| hit family protein | DW048_11145 | Not Available | Positive | 2500176 - 2500583 | 15026.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

