Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase p family protein | DW048_00835 | Not Available | Positive | 168348 - 169508 | 42446.8 |
| glutamine-hydrolyzing gmp synthase | DW048_00840 | Not Available | Negative | 169665 - 170972 | 48283.4 |
| gmp synthase (glutamine-hydrolyzing) | DW048_00845 | Not Available | Negative | 171011 - 172564 | 57645.2 |
| hypothetical protein | DW048_00850 | Not Available | Positive | 172630 - 172851 | 8561.67 |
| type i glyceraldehyde-3-phosphate dehydrogenase | DW048_00860 | Not Available | Positive | 173392 - 174402 | 35961.1 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DW048_00865 | Not Available | Positive | 174523 - 175446 | 35776.3 |
| yegs/rv2252/bmru family lipid kinase | DW048_00870 | Not Available | Positive | 175452 - 176381 | 35331.0 |
| 3-deoxy-8-phosphooctulonate synthase | DW048_00875 | Not Available | Positive | 176453 - 177250 | 28849.3 |
| ferritin | DW048_00880 | Not Available | Negative | 177411 - 177923 | 19740.4 |
| ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperone | DW048_00885 | Not Available | Negative | 177956 - 178108 | 5511.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

