Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding protein | DW048_11045 | Not Available | Positive | 2478070 - 2478441 | 13160.2 |
| glutaminase | DW048_11050 | Not Available | Negative | 2478757 - 2479671 | 34090.0 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) | DW048_11055 | Not Available | Negative | 2479684 - 2481528 | 68190.6 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | DW048_11060 | Not Available | Negative | 2481612 - 2482121 | 17745.0 |
| glycine cleavage system protein h | DW048_11065 | Not Available | Negative | 2482246 - 2482626 | 14151.4 |
| pap2 family protein | DW048_11070 | Not Available | Negative | 2482663 - 2483319 | 24797.8 |
| rna polymerase sigma-54 factor | DW048_11075 | Not Available | Negative | 2483330 - 2484799 | 56144.2 |
| xaa-pro aminopeptidase | DW048_11080 | Not Available | Positive | 2484928 - 2485158 | 8826.35 |
| glycyl-radical enzyme activating protein | DW048_11085 | Not Available | Negative | 2485508 - 2486416 | 33536.0 |
| glycyl radical protein | DW048_11090 | Not Available | Negative | 2486421 - 2488847 | 91994.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

