Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator mraz | DW048_10990 | Not Available | Negative | 2468855 - 2469319 | 18115.8 |
| hypothetical protein | DW048_10995 | Not Available | Negative | 2469354 - 2469581 | 8935.16 |
| glycerol acyltransferase | DW048_11000 | Not Available | Positive | 2469687 - 2470505 | 30976.8 |
| gnat family n-acetyltransferase | DW048_11005 | Not Available | Positive | 2470529 - 2471509 | 37508.3 |
| deoxyguanosinetriphosphate triphosphohydrolase | DW048_11010 | Not Available | Negative | 2471598 - 2472929 | 50252.4 |
| dutp diphosphatase | DW048_11015 | Not Available | Positive | 2473152 - 2473586 | 15780.1 |
| tetratricopeptide repeat protein | DW048_11020 | Not Available | Positive | 2473596 - 2475404 | 69691.2 |
| duf4292 domain-containing protein | DW048_11025 | Not Available | Positive | 2475401 - 2476234 | 31409.1 |
| peptidase m23 | DW048_11030 | Not Available | Positive | 2476234 - 2477568 | 50695.0 |
| hypothetical protein | DW048_11040 | Not Available | Negative | 2477740 - 2477949 | 8019.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

