Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsa | DW048_10935 | Not Available | Negative | 2455056 - 2456558 | 54983.8 |
| udp-n-acetylmuramate--l-alanine ligase | DW048_10945 | Not Available | Negative | 2457295 - 2458671 | 51104.2 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n- acetylglucosaminyltransferase | DW048_10950 | Not Available | Negative | 2458661 - 2459791 | 40466.6 |
| ftsw/roda/spove family cell cycle protein | DW048_10955 | Not Available | Negative | 2459856 - 2461253 | 51362.1 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | DW048_10960 | Not Available | Negative | 2461277 - 2462611 | 49945.6 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | DW048_10965 | Not Available | Negative | 2462626 - 2463894 | 47029.8 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | DW048_10970 | Not Available | Negative | 2463907 - 2465361 | 53256.2 |
| pasta domain-containing protein | DW048_10975 | Not Available | Negative | 2465380 - 2467560 | 80341.6 |
| hypothetical protein | DW048_10980 | Not Available | Negative | 2467565 - 2467939 | 14479.4 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | DW048_10985 | Not Available | Negative | 2467944 - 2468858 | 34425.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

