Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_10870 | Not Available | Negative | 2436019 - 2436918 | 34419.7 |
| nad(+) diphosphatase | DW048_10880 | Not Available | Positive | 2439287 - 2440084 | 30101.3 |
| putative transporter | DW048_10885 | Not Available | Positive | 2440161 - 2441822 | 59427.0 |
| fructose-bisphosphatase class iii | DW048_10890 | Not Available | Positive | 2441832 - 2443832 | 76533.3 |
| dna topoisomerase (atp-hydrolyzing) subunit b | DW048_10905 | Not Available | Negative | 2448954 - 2450918 | 72969.4 |
| 30s ribosomal protein s20 | DW048_10910 | Not Available | Negative | 2451365 - 2451619 | 9698.07 |
| Trna-glu | Not Available | Not Available | Positive | 2451659 - 2451733 | Not Available |
| dna repair protein reco | DW048_10920 | Not Available | Positive | 2451977 - 2452702 | 28652.8 |
| gatb/yqey domain-containing protein | DW048_10925 | Not Available | Negative | 2453243 - 2453692 | 15932.5 |
| cell division protein ftsz | DW048_10930 | Not Available | Negative | 2453714 - 2455018 | 47936.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

