Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/glucose cotransporter | DW048_10730 | Not Available | Positive | 2391126 - 2392697 | 57754.5 |
| methionine synthase | DW048_10740 | Not Available | Negative | 2392989 - 2393675 | 25266.1 |
| methylcobamide--com methyltransferase | DW048_10745 | Not Available | Negative | 2393668 - 2394678 | 36558.3 |
| histidine-type phosphatase | DW048_10750 | Not Available | Negative | 2394829 - 2396109 | 48982.6 |
| ragb/susd family nutrient uptake outer membrane protein | DW048_10755 | Not Available | Negative | 2396124 - 2397899 | 67610.9 |
| tonb-dependent receptor | DW048_10760 | Not Available | Negative | 2397923 - 2401081 | 116614.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW048_10765 | Not Available | Negative | 2401551 - 2403521 | 73830.3 |
| tonb-dependent receptor | DW048_10770 | Not Available | Negative | 2403546 - 2406746 | 118261.0 |
| hypothetical protein | DW048_10775 | Not Available | Negative | 2406781 - 2407065 | 11226.5 |
| sigma-70 family rna polymerase sigma factor | DW048_10780 | Not Available | Negative | 2407114 - 2407668 | 21477.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

