Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| v-type atp synthase subunit k | DW048_10675 | Not Available | Negative | 2377714 - 2378178 | 15421.2 |
| v-type atp synthase subunit i | DW048_10680 | Not Available | Negative | 2378392 - 2380197 | 67265.4 |
| v-type atp synthase subunit d | DW048_10685 | Not Available | Negative | 2380194 - 2380799 | 23447.8 |
| v-type atp synthase subunit b | DW048_10690 | Not Available | Negative | 2380814 - 2382136 | 48182.8 |
| v-type atp synthase subunit a | DW048_10695 | Not Available | Negative | 2382172 - 2383926 | 65785.3 |
| duf2764 domain-containing protein | DW048_10700 | Not Available | Negative | 2383945 - 2384781 | 32594.0 |
| hypothetical protein | DW048_10705 | Not Available | Negative | 2384791 - 2385381 | 21755.7 |
| hypothetical protein | DW048_10710 | Not Available | Positive | 2385464 - 2385667 | 8011.02 |
| alpha-xylosidase | DW048_10720 | Not Available | Positive | 2387038 - 2389284 | 86415.5 |
| cobalamin-binding protein | DW048_10725 | Not Available | Positive | 2389290 - 2391092 | 66708.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

