Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathionylspermidine synthase family protein | DW048_10610 | Not Available | Negative | 2363113 - 2364237 | 43089.6 |
| hypothetical protein | DW048_10615 | Not Available | Negative | 2364250 - 2364603 | 12947.3 |
| thiamine phosphate synthase | DW048_10620 | Not Available | Positive | 2364823 - 2365431 | 22934.7 |
| ribose-phosphate pyrophosphokinase | DW048_10625 | Not Available | Positive | 2365674 - 2366612 | 34190.5 |
| extracellular solute-binding protein | DW048_10630 | Not Available | Negative | 2366742 - 2368052 | 50256.2 |
| abc transporter permease | DW048_10635 | Not Available | Negative | 2368080 - 2368871 | 28734.3 |
| abc transporter permease | DW048_10640 | Not Available | Negative | 2368865 - 2369638 | 28468.5 |
| polyamine abc transporter atp-binding protein | DW048_10645 | Not Available | Negative | 2369675 - 2371063 | 51860.2 |
| ahpc/tsa family protein | DW048_10660 | Not Available | Positive | 2371880 - 2372971 | 40190.0 |
| alpha-glucan family phosphorylase | DW048_10665 | Not Available | Negative | 2373198 - 2375762 | 98180.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

