Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| degt/dnrj/eryc1/strs family aminotransferase | DW048_10490 | Not Available | Negative | 2334829 - 2335938 | 41331.9 |
| transcriptional regulator | DW048_10500 | Not Available | Negative | 2337428 - 2338177 | 28896.8 |
| abc transporter atp-binding protein | DW048_10510 | Not Available | Negative | 2341663 - 2342373 | 26407.0 |
| efflux rnd transporter periplasmic adaptor subunit | DW048_10515 | Not Available | Negative | 2342387 - 2343637 | 47799.6 |
| tolc family protein | DW048_10520 | Not Available | Negative | 2343643 - 2344950 | 50678.0 |
| sigma-54-dependent fis family transcriptional regulator | DW048_10525 | Not Available | Positive | 2345282 - 2346613 | 50199.9 |
| pas domain-containing protein | DW048_10530 | Not Available | Positive | 2346619 - 2347941 | 50256.6 |
| glutamine synthetase | DW048_10540 | Not Available | Positive | 2349805 - 2351307 | 56007.0 |
| Trna-gly | Not Available | Not Available | Positive | 2351428 - 2351503 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2351516 - 2351599 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

