Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_00765 | Not Available | Negative | 148826 - 149011 | 7314.11 |
| hypothetical protein | DW048_00770 | Not Available | Positive | 149198 - 149803 | 23310.8 |
| hypothetical protein | DW048_00780 | Not Available | Positive | 153744 - 154016 | 10520.9 |
| dna-binding response regulator | DW048_00785 | Not Available | Negative | 154045 - 154818 | 29809.8 |
| histidine kinase | DW048_00790 | Not Available | Negative | 154811 - 155839 | 38942.7 |
| efflux rnd transporter periplasmic adaptor subunit | DW048_00805 | Not Available | Negative | 160334 - 161359 | 37984.2 |
| glsb/yeaq/ymge family stress response membrane protein | DW048_00810 | Not Available | Positive | 161599 - 161850 | 8688.23 |
| tolc family protein | DW048_00815 | Not Available | Negative | 161939 - 163396 | 54833.0 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | DW048_00820 | Not Available | Negative | 163374 - 166523 | 115620.0 |
| hypothetical protein | DW048_00830 | Not Available | Negative | 167809 - 168231 | 16035.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

