Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | DW048_10420 | Not Available | Negative | 2319262 - 2319990 | 27084.3 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | DW048_10425 | Not Available | Negative | 2320001 - 2321278 | 47052.8 |
| acyl-coa thioesterase | DW048_10430 | Not Available | Positive | 2321401 - 2321850 | 17204.7 |
| ragb/susd family nutrient uptake outer membrane protein | DW048_10435 | Not Available | Negative | 2321979 - 2323544 | 58966.7 |
| glycosyltransferase family 1 protein | DW048_10450 | Not Available | Negative | 2328408 - 2329535 | 42865.1 |
| hypothetical protein | DW048_10460 | Not Available | Negative | 2330685 - 2330876 | 7552.15 |
| sdr family oxidoreductase | DW048_10465 | Not Available | Negative | 2330948 - 2331670 | 26720.1 |
| long-chain fatty acid--coa ligase | DW048_10470 | Not Available | Negative | 2331667 - 2332875 | 45859.1 |
| acyl carrier protein | DW048_10475 | Not Available | Negative | 2332889 - 2333113 | 8395.04 |
| gnat family n-acetyltransferase | DW048_10480 | Not Available | Negative | 2333127 - 2333600 | 18038.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

