Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s8 | DW048_10305 | Not Available | Positive | 2304253 - 2304648 | 14565.0 |
| 50s ribosomal protein l6 | DW048_10310 | Not Available | Positive | 2304663 - 2305232 | 20926.5 |
| 30s ribosomal protein s5 | DW048_10320 | Not Available | Positive | 2305598 - 2306116 | 17941.0 |
| 50s ribosomal protein l30 | DW048_10325 | Not Available | Positive | 2306126 - 2306302 | 6433.21 |
| 50s ribosomal protein l15 | DW048_10330 | Not Available | Positive | 2306333 - 2306779 | 15681.0 |
| preprotein translocase subunit secy | DW048_10335 | Not Available | Positive | 2306784 - 2308130 | 49282.7 |
| type i methionyl aminopeptidase | DW048_10340 | Not Available | Positive | 2308141 - 2308938 | 29142.0 |
| translation initiation factor if-1 | DW048_10345 | Not Available | Positive | 2308940 - 2309158 | 8235.14 |
| 50s ribosomal protein l36 | DW048_10350 | Not Available | Positive | 2309173 - 2309289 | 4586.82 |
| 30s ribosomal protein s13 | DW048_10355 | Not Available | Positive | 2309323 - 2309703 | 14121.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

