Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit beta | DW048_10200 | Not Available | Positive | 2285358 - 2289170 | 142493.0 |
| duf3467 domain-containing protein | DW048_10210 | Not Available | Positive | 2293703 - 2294044 | 12561.0 |
| 30s ribosomal protein s12 | DW048_10215 | Not Available | Positive | 2294235 - 2294648 | 14994.4 |
| 30s ribosomal protein s7 | DW048_10220 | Not Available | Positive | 2294798 - 2295274 | 18204.1 |
| elongation factor g | DW048_10225 | Not Available | Positive | 2295306 - 2297423 | 77460.5 |
| 30s ribosomal protein s10 | DW048_10230 | Not Available | Positive | 2297508 - 2297813 | 11419.0 |
| 50s ribosomal protein l3 | DW048_10235 | Not Available | Positive | 2297835 - 2298452 | 21900.8 |
| 50s ribosomal protein l4 | DW048_10240 | Not Available | Positive | 2298452 - 2299078 | 23045.8 |
| 50s ribosomal protein l23 | DW048_10245 | Not Available | Positive | 2299100 - 2299390 | 10804.2 |
| 50s ribosomal protein l2 | DW048_10250 | Not Available | Positive | 2299396 - 2300217 | 29602.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

