Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | DW048_10095 | Not Available | Positive | 2272747 - 2274132 | 53356.8 |
| dna-binding response regulator | DW048_10100 | Not Available | Positive | 2274157 - 2274858 | 26556.5 |
| porin family protein | DW048_10110 | Not Available | Negative | 2275978 - 2276469 | 17975.4 |
| gamma carbonic anhydrase family protein | DW048_10115 | Not Available | Negative | 2276515 - 2277039 | 18532.5 |
| aminopeptidase p family protein | DW048_10120 | Not Available | Negative | 2277049 - 2278830 | 66881.2 |
| 30s ribosomal protein s21 | DW048_10125 | Not Available | Positive | 2278999 - 2279190 | 7526.36 |
| recombinase | DW048_10130 | Not Available | Positive | 2279268 - 2280149 | 34003.6 |
| ribosome-associated translation inhibitor raia | DW048_10135 | Not Available | Positive | 2280164 - 2280463 | 11325.7 |
| Trna-thr | Not Available | Not Available | Positive | 2280562 - 2280638 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 2280679 - 2280761 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

