Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose/gdp-mannose dehydrogenase family protein | DW048_10030 | Not Available | Negative | 2260417 - 2261730 | 48150.3 |
| spor domain-containing protein | DW048_10035 | Not Available | Positive | 2261849 - 2262979 | 42083.4 |
| fha domain-containing protein | DW048_10040 | Not Available | Positive | 2262995 - 2263519 | 19818.0 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | DW048_10045 | Not Available | Positive | 2263524 - 2264033 | 19446.2 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | DW048_10050 | Not Available | Positive | 2264042 - 2265079 | 37449.5 |
| alpha-ribazole phosphatase | DW048_10060 | Not Available | Positive | 2265824 - 2266354 | 20094.8 |
| duf1622 domain-containing protein | DW048_10065 | Not Available | Positive | 2266406 - 2266747 | 12539.8 |
| transposase family protein | DW048_10070 | Not Available | Negative | 2267051 - 2267217 | 6469.75 |
| Trna-asn | Not Available | Not Available | Positive | 2267386 - 2267459 | Not Available |
| adenosine kinase | DW048_10080 | Not Available | Positive | 2267540 - 2268526 | 35238.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

