Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| port family protein | DW048_09885 | Not Available | Negative | 2224644 - 2225321 | 25187.3 |
| alpha-1,2-fucosyltransferase | DW048_09900 | Not Available | Positive | 2227112 - 2227957 | 33694.5 |
| Trna-pro | Not Available | Not Available | Positive | 2228373 - 2228447 | Not Available |
| atp-binding protein | DW048_09915 | Not Available | Negative | 2228608 - 2229939 | 50551.9 |
| sigma-54-dependent fis family transcriptional regulator | DW048_09920 | Not Available | Negative | 2229936 - 2231303 | 51893.1 |
| sel1 repeat family protein | DW048_09925 | Not Available | Positive | 2231527 - 2232450 | 34910.5 |
| hlyd family efflux transporter periplasmic adaptor subunit | DW048_09935 | Not Available | Positive | 2234049 - 2235299 | 48108.4 |
| abc transporter permease | DW048_09940 | Not Available | Positive | 2235310 - 2237706 | 92748.7 |
| abc transporter permease | DW048_09950 | Not Available | Positive | 2240109 - 2242508 | 91452.7 |
| abc transporter atp-binding protein | DW048_09955 | Not Available | Positive | 2242528 - 2243202 | 24767.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

