Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactose mutarotase | DW048_00710 | Not Available | Positive | 139182 - 140315 | 41888.4 |
| sigma-70 family rna polymerase sigma factor | DW048_00715 | Not Available | Positive | 140502 - 140972 | 18010.0 |
| duf5024 domain-containing protein | DW048_00725 | Not Available | Positive | 141550 - 142164 | 22972.6 |
| mfs transporter | DW048_00730 | Not Available | Positive | 142365 - 143642 | 46736.2 |
| dna helicase uvrb | DW048_00735 | Not Available | Positive | 143701 - 144267 | 21270.7 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | DW048_00740 | Not Available | Positive | 144296 - 144997 | 26145.7 |
| duf4836 family protein | DW048_00745 | Not Available | Positive | 145002 - 146534 | 56144.9 |
| atp-binding cassette domain-containing protein | DW048_00750 | Not Available | Positive | 146531 - 147175 | 24439.4 |
| abc transporter permease | DW048_00755 | Not Available | Positive | 147172 - 148374 | 44901.3 |
| yjbq family protein | DW048_00760 | Not Available | Positive | 148383 - 148796 | 15533.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

