Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4251 domain-containing protein | DW048_09835 | Not Available | Positive | 2216381 - 2216971 | 21487.3 |
| methylated-dna--[protein]-cysteine s-methyltransferase | DW048_09840 | Not Available | Negative | 2217065 - 2217592 | 19617.8 |
| aspartate--trna(asp/asn) ligase | DW048_09845 | Not Available | Negative | 2217767 - 2219530 | 66472.9 |
| thioredoxin | DW048_09850 | Not Available | Negative | 2219659 - 2219955 | 11450.8 |
| duf2023 family protein | DW048_09855 | Not Available | Negative | 2220288 - 2220632 | 13416.7 |
| flavodoxin flda | DW048_09860 | Not Available | Negative | 2220649 - 2221152 | 17905.0 |
| porin family protein | DW048_09865 | Not Available | Negative | 2221424 - 2221945 | 19772.5 |
| hypothetical protein | DW048_09870 | Not Available | Negative | 2221967 - 2222488 | 21224.9 |
| port family protein | DW048_09875 | Not Available | Negative | 2222854 - 2223492 | 22822.1 |
| ion transporter | DW048_09880 | Not Available | Negative | 2223717 - 2224478 | 29116.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

