Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrillin family protein | DW048_09635 | Not Available | Positive | 2183216 - 2184361 | 42339.7 |
| hypothetical protein | DW048_09640 | Not Available | Negative | 2184542 - 2184799 | 9309.24 |
| para family protein | DW048_09645 | Not Available | Negative | 2184804 - 2185562 | 27555.5 |
| hypothetical protein | DW048_09650 | Not Available | Positive | 2185849 - 2186178 | 12743.1 |
| dna-binding protein | DW048_09655 | Not Available | Positive | 2186182 - 2187018 | 32255.7 |
| sensor histidine kinase | DW048_09665 | Not Available | Negative | 2188136 - 2188615 | 17607.1 |
| radical sam mobile pair protein b | DW048_09670 | Not Available | Negative | 2188664 - 2189539 | 34028.9 |
| radical sam mobile pair protein a | DW048_09675 | Not Available | Negative | 2189536 - 2190204 | 26030.2 |
| arac family transcriptional regulator | DW048_09685 | Not Available | Positive | 2191107 - 2192006 | 35622.9 |
| arac family transcriptional regulator | DW048_09690 | Not Available | Positive | 2192265 - 2192924 | 25862.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

