Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4138 domain-containing protein | DW048_09445 | Not Available | Negative | 2151662 - 2152774 | 43021.0 |
| hypothetical protein | DW048_09450 | Not Available | Negative | 2152787 - 2152972 | 7049.84 |
| conjugative transposon protein tram | DW048_09455 | Not Available | Negative | 2152969 - 2154252 | 48409.8 |
| hypothetical protein | DW048_09460 | Not Available | Negative | 2154239 - 2154937 | 26103.8 |
| hypothetical protein | DW048_09470 | Not Available | Negative | 2156003 - 2156599 | 22521.2 |
| trag family conjugative transposon atpase | DW048_09480 | Not Available | Negative | 2156818 - 2159424 | 99450.9 |
| hypothetical protein | DW048_09485 | Not Available | Negative | 2159421 - 2159732 | 11796.2 |
| hypothetical protein | DW048_09490 | Not Available | Negative | 2159745 - 2160089 | 12471.6 |
| hypothetical protein | DW048_09495 | Not Available | Negative | 2160108 - 2160452 | 13247.2 |
| hypothetical protein | DW048_09500 | Not Available | Negative | 2160449 - 2160661 | 7739.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

