Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidinotransferase | DW048_09250 | Not Available | Positive | 2120699 - 2121610 | 34323.0 |
| ornithine--oxo-acid transaminase | DW048_09255 | Not Available | Positive | 2121625 - 2122860 | 45652.0 |
| 7-cyano-7-deazaguanine synthase quec | DW048_09265 | Not Available | Positive | 2123955 - 2124626 | 24891.0 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | DW048_09270 | Not Available | Positive | 2124845 - 2125300 | 17765.2 |
| Trna-ser | Not Available | Not Available | Positive | 2125388 - 2125478 | Not Available |
| hypothetical protein | DW048_09280 | Not Available | Negative | 2125695 - 2126054 | 13840.7 |
| hypothetical protein | DW048_09285 | Not Available | Negative | 2126265 - 2126810 | 21153.2 |
| peptidase m48 | DW048_09290 | Not Available | Negative | 2126840 - 2127622 | 30287.0 |
| duf3944 domain-containing protein | DW048_09295 | Not Available | Negative | 2127641 - 2128360 | 27400.5 |
| duf4343 domain-containing protein | DW048_09300 | Not Available | Negative | 2128432 - 2129076 | 24720.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

