Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminodeoxychorismate synthase component i | DW048_09200 | Not Available | Positive | 2111070 - 2112053 | 37519.0 |
| 4-amino-4-deoxychorismate lyase | DW048_09205 | Not Available | Positive | 2112037 - 2112630 | 22693.3 |
| hypothetical protein | DW048_09210 | Not Available | Positive | 2112720 - 2113862 | 42990.3 |
| mfs transporter | DW048_09215 | Not Available | Negative | 2113859 - 2115055 | 43930.8 |
| phenylalanine--trna ligase subunit alpha | DW048_09220 | Not Available | Negative | 2115183 - 2116217 | 38981.6 |
| duf4348 domain-containing protein | DW048_09225 | Not Available | Positive | 2116329 - 2117189 | 33508.7 |
| udp-n-acetylmuramate dehydrogenase | DW048_09230 | Not Available | Positive | 2117201 - 2118214 | 37617.2 |
| mbl fold metallo-hydrolase | DW048_09235 | Not Available | Positive | 2118223 - 2118999 | 29141.4 |
| endonuclease iii | DW048_09240 | Not Available | Negative | 2118994 - 2119638 | 24101.6 |
| amidinotransferase | DW048_09245 | Not Available | Positive | 2119756 - 2120676 | 35537.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

