Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DW048_09135 | Not Available | Positive | 2088486 - 2090120 | 62739.8 |
| glycoside hydrolase family 97 protein | DW048_09150 | Not Available | Positive | 2093714 - 2095690 | 74752.2 |
| hybrid sensor histidine kinase/response regulator | DW048_09155 | Not Available | Positive | 2095892 - 2099851 | 148923.0 |
| capa family protein | DW048_09160 | Not Available | Positive | 2099911 - 2100984 | 40856.5 |
| Trna-his | Not Available | Not Available | Positive | 2101060 - 2101136 | Not Available |
| sigma-70 family rna polymerase sigma factor | DW048_09170 | Not Available | Positive | 2101212 - 2101778 | 22575.3 |
| fecr family protein | DW048_09175 | Not Available | Positive | 2101851 - 2102930 | 41331.8 |
| ragb/susd family nutrient uptake outer membrane protein | DW048_09185 | Not Available | Positive | 2106500 - 2107891 | 53206.6 |
| tlpa family protein disulfide reductase | DW048_09190 | Not Available | Positive | 2107903 - 2109279 | 51121.2 |
| ahpc/tsa family protein | DW048_09195 | Not Available | Positive | 2109287 - 2110465 | 44819.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

