Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | DW048_08995 | Not Available | Negative | 2053414 - 2053722 | 12236.0 |
| dna-binding protein | DW048_09000 | Not Available | Negative | 2053805 - 2054116 | 12302.7 |
| hypothetical protein | DW048_09005 | Not Available | Positive | 2054150 - 2054500 | 13249.7 |
| duf3408 domain-containing protein | DW048_09010 | Not Available | Positive | 2054514 - 2054993 | 18369.5 |
| plasmid mobilization relaxosome protein mobc | DW048_09015 | Not Available | Positive | 2055178 - 2055591 | 15572.8 |
| hypothetical protein | DW048_09025 | Not Available | Positive | 2056582 - 2057325 | 28361.9 |
| peptidase s51 | DW048_09030 | Not Available | Negative | 2057619 - 2058245 | 23458.7 |
| hypothetical protein | DW048_09035 | Not Available | Positive | 2058539 - 2058784 | 9256.91 |
| arabinogalactan endo-1,4-beta-galactosidase | DW048_09040 | Not Available | Negative | 2059156 - 2060298 | 43136.1 |
| susf/suse family outer membrane protein | DW048_09055 | Not Available | Negative | 2063958 - 2065115 | 41909.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

