Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose isomerase | DW048_08935 | Not Available | Negative | 2040221 - 2041996 | 65624.0 |
| gntr family transcriptional regulator | DW048_08940 | Not Available | Negative | 2042018 - 2042998 | 38069.7 |
| hypothetical protein | DW048_08945 | Not Available | Negative | 2043174 - 2043380 | 7466.17 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | DW048_08950 | Not Available | Positive | 2043447 - 2044961 | 55852.0 |
| hypothetical protein | DW048_08960 | Not Available | Positive | 2045711 - 2046898 | 44355.6 |
| peptidase | DW048_08965 | Not Available | Positive | 2047166 - 2049022 | 67259.1 |
| hypothetical protein | DW048_08970 | Not Available | Positive | 2049045 - 2050025 | 35247.9 |
| site-specific integrase | DW048_08980 | Not Available | Positive | 2050314 - 2051546 | 46632.0 |
| site-specific integrase | DW048_08985 | Not Available | Positive | 2051610 - 2052821 | 46144.9 |
| hypothetical protein | DW048_08990 | Not Available | Positive | 2052818 - 2053180 | 13738.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

