Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_08880 | Not Available | Positive | 2024404 - 2024604 | 7774.93 |
| gnat family n-acetyltransferase | DW048_08885 | Not Available | Negative | 2024715 - 2025137 | 16259.7 |
| glycoside hydrolase | DW048_08890 | Not Available | Negative | 2025296 - 2027230 | 72830.6 |
| duf4981 domain-containing protein | DW048_08895 | Not Available | Negative | 2027248 - 2030424 | 121380.0 |
| lysine exporter lyso family protein | DW048_08900 | Not Available | Negative | 2030438 - 2031040 | 21649.9 |
| duf340 domain-containing protein | DW048_08905 | Not Available | Negative | 2031037 - 2031318 | 10217.2 |
| ragb/susd family nutrient uptake outer membrane protein | DW048_08910 | Not Available | Negative | 2031433 - 2032950 | 57976.4 |
| tonb-dependent receptor | DW048_08915 | Not Available | Negative | 2032971 - 2036099 | 116561.0 |
| ribonuclease hii | DW048_08925 | Not Available | Positive | 2038049 - 2038654 | 22930.4 |
| l-fucose:h+ symporter permease | DW048_08930 | Not Available | Negative | 2038797 - 2040110 | 48465.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

