Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_08705 | Not Available | Negative | 1991734 - 1991970 | 8537.17 |
| hypothetical protein | DW048_08715 | Not Available | Negative | 1992646 - 1993044 | 15305.4 |
| atp-binding protein | DW048_08720 | Not Available | Negative | 1993041 - 1993910 | 32741.1 |
| kinase | DW048_08725 | Not Available | Negative | 1993946 - 1995985 | 79309.3 |
| hypothetical protein | DW048_08730 | Not Available | Negative | 1996001 - 1996222 | 8704.04 |
| arsr family transcriptional regulator | DW048_08735 | Not Available | Negative | 1996212 - 1996412 | 7270.89 |
| Trna-undet | Not Available | Not Available | Positive | 1996436 - 1996521 | Not Available |
| hypothetical protein | DW048_08745 | Not Available | Negative | 1996532 - 1996723 | 7441.04 |
| xre family transcriptional regulator | DW048_08750 | Not Available | Positive | 1996859 - 1997278 | 15755.9 |
| hypothetical protein | DW048_08755 | Not Available | Negative | 1997447 - 1997671 | 9080.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

