Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_00590 | Not Available | Positive | 112171 - 112545 | 14296.9 |
| duf4858 domain-containing protein | DW048_00595 | Not Available | Negative | 112492 - 113262 | 29556.6 |
| bifunctional dihydroorotate dehydrogenase b nad binding subunit/nadph-dependent glutamate synthase | DW048_00600 | Not Available | Negative | 113673 - 115970 | 82922.6 |
| mfs transporter | DW048_00605 | Not Available | Negative | 116153 - 117370 | 43390.6 |
| serine--trna ligase | DW048_00610 | Not Available | Negative | 117510 - 118784 | 47884.3 |
| nicotinamide riboside transporter pnuc | DW048_00615 | Not Available | Positive | 118904 - 119476 | 22114.5 |
| thiamine diphosphokinase | DW048_00620 | Not Available | Positive | 119463 - 120098 | 23807.5 |
| 50s ribosomal protein l27 | DW048_00625 | Not Available | Negative | 120155 - 120418 | 9251.19 |
| 50s ribosomal protein l21 | DW048_00630 | Not Available | Negative | 120440 - 120757 | 11743.4 |
| had family hydrolase | DW048_00635 | Not Available | Negative | 120971 - 123040 | 79713.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

