Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatase pap2 family protein | DW048_08320 | Not Available | Negative | 1891945 - 1892721 | 29160.8 |
| hypothetical protein | DW048_08325 | Not Available | Negative | 1893050 - 1895446 | 90613.5 |
| alpha-1,3/4-fucosidase | DW048_08330 | Not Available | Negative | 1895693 - 1897552 | 69735.9 |
| beta-hexosaminidase | DW048_08340 | Not Available | Negative | 1900637 - 1902952 | 87330.9 |
| duf4976 domain-containing protein | DW048_08345 | Not Available | Negative | 1902970 - 1904553 | 61685.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW048_08355 | Not Available | Negative | 1904759 - 1906594 | 68298.1 |
| tonb-dependent receptor | DW048_08360 | Not Available | Negative | 1906623 - 1909844 | 116953.0 |
| hybrid sensor histidine kinase/response regulator | DW048_08370 | Not Available | Positive | 1911646 - 1915578 | 149332.0 |
| rna-binding protein | DW048_08375 | Not Available | Positive | 1915844 - 1916089 | 9144.0 |
| threonine/serine exporter family protein | DW048_08380 | Not Available | Negative | 1916188 - 1917534 | 50176.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

