Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2156 domain-containing protein | DW048_08255 | Not Available | Negative | 1880264 - 1881166 | 34328.3 |
| lrgb family protein | DW048_08260 | Not Available | Negative | 1881390 - 1882085 | 24440.0 |
| acetate kinase | DW048_08275 | Not Available | Positive | 1883659 - 1884855 | 42736.9 |
| udp-2,3-diacylglucosamine diphosphatase | DW048_08280 | Not Available | Negative | 1884921 - 1885688 | 29795.7 |
| duf59 domain-containing protein | DW048_08285 | Not Available | Negative | 1885821 - 1886141 | 11973.4 |
| dna repair protein radc | DW048_08290 | Not Available | Negative | 1886178 - 1886867 | 25631.0 |
| glycosyltransferase | DW048_08295 | Not Available | Negative | 1886940 - 1887929 | 37604.6 |
| elongation factor p | DW048_08300 | Not Available | Negative | 1888030 - 1888596 | 21126.5 |
| 50s ribosomal protein l34 | DW048_08305 | Not Available | Positive | 1888799 - 1888954 | 6019.34 |
| atpase | DW048_08315 | Not Available | Negative | 1890561 - 1891706 | 42910.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

